Me
Photo: Sylvain Crouzet


I am a Professor in the Department of Mathematics at the University of Wisconsin-Madison, where I am affiliated with the Probability Group and the Applied Mathematics Group. My CV can be found here.

I work at the intersection of applied probability, statistics and theoretical computer science, with an emphasis on biological applications. More details on my research interests and publications can be found here. My work is currently supported by NSF grants DMS-1149312 (CAREER), DMS-1614242 and CCF-1740707 (TRIPODS).

I am an associate editor for the Annals of Applied Probability. Submit a paper here.


News

Aug 2017: Our new Institute for Foundations of Data Science has been funded through the NSF TRIPODS and NSF Growing Convergence Research programs. More details here and here.

May 2017: My Ph.D. student Kun-Chieh (Jason) Wang successfully defended his thesis.


Currently Teaching

Fall 2017: MATH 833 - Topics in Probability: Modern Discrete Probability

Fall 2017: MATH 431 - Introduction to the Theory of Probability


Lecture notes

A graduate course in modern discrete probability

A topics course on stochastic processes in evolutionary genetics

The first semester of graduate probability theory


Recent Preprints (full list here)

Generalized least squares can overcome the critical threshold in respondent-driven sampling
Preprint, 2017. With Karl Rohe.
Critical threshold for ancestral reconstruction by maximum parsimony on general phylogenies
Preprint, 2017. With Jason Wang.
Coalescent-based species tree estimation: a stochastic Farris transform
Preprint, 2017. With Gautam Dasarathy, Elchanan Mossel, Robert Nowak.
Efficient and consistent inference of ancestral sequences in an evolutionary model with insertions and deletions under dense taxon sampling
Preprint, 2017. With L. Fan.
Necessary and sufficient conditions for consistent root reconstruction in Markov models on trees
Preprint, 2017. With L. Fan.
Circular Networks from Distorted Metrics
Preprint, 2017. With J. Wang.
Species tree estimation using ASTRAL: how many genes are enough?
Preprint, 2017. With S. Shekhar and S. Mirarab.
Conference abstract in Proceedings of RECOMB 2017, 393-395.
Species trees are recoverable from unrooted gene tree topologies under a constant rate of horizontal gene transfer
Preprint, 2017. With C. Daskalakis.
Conference abstract in ACM-SIAM SODA 2016, 1621-1630.
Phase transition in the sample complexity of likelihood-based phylogeny inference
To appear in Probability Theory and Related Fields, 2017. With A. Sly.
Distance-based species tree estimation under the coalescent: information-theoretic trade-off between number of loci and sequence length
To appear in The Annals of Applied Probability, 2017. With E. Mossel.
Conference abstract in Proceedings of RANDOM 2015, 931-942.

A full list of publications is available here.


Contact Information

Office: Van Vleck 823
Phone: 608-263-3053
Fax: 608-263-8891
lastname[at]math[dot]wisc[dot]edu
Department of Mathematics
University of Wisconsin-Madison
480 Lincoln Drive
Madison, WI 53706
last modified: aug 25, 2017